Function reference • RLSeq

All functions
`RLRanges()`	Construct RLRanges Dataset
`RLRangesFromRLBase()`	Access RLBase samples as RLRanges
`rlresult()`	RLSeq Results
`RLSeq()`	RLSeq
`analyzeRLFS()`	Analyze RLFS
`auxdata`	Auxiliary Data
`available_genomes`	Available Genomes
`checkRLFSAnno()`	Check RLFS
`corrAnalyze()`	Analyze Correlations
`corrHeatmap()`	Plot Correlation Results
`featureEnrich()`	Test Genomic Feature Enrichment
`feature_ggplot()`	Feature ggplot
`geneAnnotation()`	Annotate R-Loops with Genes
`genomeMasks`	Genome Masks
`getChromSizes()`	Get Chrom Sizes
`getGSSignal()`	Get GS Signal
`getRLFSAnno()`	Get RLFS
`noiseAnalyze()`	Analyze sample noise
`noiseComparisonPlot()`	Creates a metaplot for comparing noise analysis results with RLBase
`peak_stats()`	Build peak statistics tibble
`plotEnrichment()`	Plot Enrichment Test Results
`plotFingerprint()`	Plot noise analysis results as a fingerprint plot
`plotRLFSRes()`	Plot RLFS analysis results
`plotRLRegionOverlap()`	Plot RL-Region overlap with RLRanges
`plotTxFeatureOverlap()`	Plot Transcript Feature Overlap
`predictCondition()`	Predict Condition
`randomWindows`	Random Genomic Windows
`report()`	RLSeq Report
`rlRegionTest()`	R-Loop region test
`rlbaseNoiseAnalyze`	RLBase Sample Noise Analysis Results
`rlsampleTxOl`	RLBase Sample Transcript Feature Overlaps
`tableToRegions()`	Table to Regions
`txFeatureOverlap()`	Calculate overlap with transcript features
`urlExists()`	Check if URL exists

Reference